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Uncultivated Nitrosomonas sp. UBA1843 genome recovered from SRX201528

Identifiers
BioSample: SAMN06451740; Sample name: Nitrosomonas sp. UBA1843; SRA: SRS2032377
Organism
Nitrosomonas sp. UBA1843
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas; unclassified Nitrosomonas
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA1843
isolation sourceActivated sludge form a lab-scale nitrification reactor
metagenome sourcemetagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX201528 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated93.02%
contamination_estimated0.47%
environmental_sampletrue
genome_coverage28.86
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the metagenome reads: SRR609198.
Description

Uncultivated genome recovered from an assembly of the SRX201528 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451740
ID:
6451740

BioProject SRA Nucleotide

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