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Uncultivated Megasphaera sp. UBA4352 genome recovered from SRX290708

Identifiers
BioSample: SAMN06451610; Sample name: Megasphaera sp. UBA4352; SRA: SRS2032878
Organism
Megasphaera sp. UBA4352
cellular organisms; Bacteria; Bacillati; Bacillota; Negativicutes; Veillonellales; Veillonellaceae; Megasphaera; unclassified Megasphaera
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA4352
isolation sourcelow methane producing sheep
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX290708 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated92.44%
contamination_estimated0.60%
environmental_sampletrue
genome_coverage13.77
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873598.
Description

Uncultivated genome recovered from an assembly of the SRX290708 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451610
ID:
6451610

BioProject SRA Nucleotide

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