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Uncultivated Bifidobacterium sp. UBA1109 genome recovered from SRX834660

Identifiers
BioSample: SAMN06451563; Sample name: Bifidobacterium sp. UBA1109; SRA: SRS2035335
Organism
Bifidobacterium sp. UBA1109
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; unclassified Bifidobacterium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationKenya
isolateUBA1109
isolation sourcefeces
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX834660 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated72.59%
contamination_estimated0.68%
environmental_sampletrue
genome_coverage10.03
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747059.
Description

Uncultivated genome recovered from an assembly of the SRX834660 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451563
ID:
6451563

BioProject SRA Nucleotide

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