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Uncultivated Microbacterium sp. UBA5159 genome recovered from ERX555992

Identifiers
BioSample: SAMN06451562; Sample name: Microbacterium sp. UBA5159; SRA: SRS2031309
Organism
Microbacterium sp. UBA5159
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae; Microbacterium; unclassified Microbacterium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA5159
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX555992 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated81.62%
contamination_estimated3.44%
environmental_sampletrue
genome_coverage342.7
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599112.
Description

Uncultivated genome recovered from an assembly of the ERX555992 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451562
ID:
6451562

BioProject SRA Nucleotide

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