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Uncultivated Geobacter sp. UBA6108 genome recovered from SRX327521

Identifiers
BioSample: SAMN06451555; Sample name: Geobacter sp. UBA6108; SRA: SRS2033349
Organism
Geobacter sp. UBA6108
cellular organisms; Bacteria; Pseudomonadati; Thermodesulfobacteriota; Desulfuromonadia; Geobacterales; Geobacteraceae; Geobacter; unclassified Geobacter
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Syncrude tailings pond, Wood Buffalo, Alberta
isolateUBA6108
isolation sourcewaste water
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX327521 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated92.26%
contamination_estimated3.23%
environmental_sampletrue
genome_coverage38.81
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR943315,SRR943314,SRR943313,SRR943312,SRR942927,SRR943311,SRR943309.
Description

Uncultivated genome recovered from an assembly of the SRX327521 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451555
ID:
6451555

BioProject SRA Nucleotide

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