U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Empedobacter sp. UBA1863 genome recovered from SRX822707

Identifiers
BioSample: SAMN06451464; Sample name: Empedobacter sp. UBA1863; SRA: SRS2039123
Organism
Empedobacter sp. UBA1863
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae; Empedobacter; unclassified Empedobacter
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA1863
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822707 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated98.92%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage63.77
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749324.
Description

Uncultivated genome recovered from an assembly of the SRX822707 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451464
ID:
6451464

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center