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Uncultivated Proteobacteria bacterium UBA6594 genome recovered from ERX552274

Identifiers
BioSample: SAMN06451401; Sample name: Proteobacteria bacterium UBA6594; SRA: SRS2030772
Organism
Proteobacteria bacterium UBA6594
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; unclassified Pseudomonadota
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA6594
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX552274 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated75.11%
contamination_estimated2.33%
environmental_sampletrue
genome_coverage12.7
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR594340.
Description

Uncultivated genome recovered from an assembly of the ERX552274 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451401
ID:
6451401

BioProject SRA Nucleotide

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