U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Atopobiaceae bacterium UBA5428 genome recovered from SRX691281

Identifiers
BioSample: SAMN06451294; Sample name: Atopobiaceae bacterium UBA5428; SRA: SRS2035972
Organism
Atopobiaceae bacterium UBA5428
cellular organisms; Bacteria; Bacillati; Actinomycetota; Coriobacteriia; Coriobacteriales; Atopobiaceae; unclassified Atopobiaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Chengdu
isolateUBA5428
isolation sourcemud
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX691281 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated54.26%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage148.71
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1562006.
Description

Uncultivated genome recovered from an assembly of the SRX691281 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451294
ID:
6451294

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center