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Uncultivated Pseudomonas stutzeri UBA7250 genome recovered from SRX822583

Identifiers
BioSample: SAMN06451198; Sample name: Pseudomonas stutzeri UBA7250; SRA: SRS2039032
Organism
Stutzerimonas stutzeri
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Stutzerimonas; Stutzerimonas stutzeri group; Stutzerimonas stutzeri subgroup
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA7250
isolation sourcewood
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822583 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated72.30%
contamination_estimated0.10%
environmental_sampletrue
genome_coverage8.37
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749200.
Description

Uncultivated genome recovered from an assembly of the SRX822583 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451198
ID:
6451198

BioProject SRA Nucleotide

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