U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Alteromonas sp. UBA2493 genome recovered from ERX552368

Identifiers
BioSample: SAMN06451084; Sample name: Alteromonas sp. UBA2493; SRA: SRS2031104
Organism
Alteromonas sp. UBA2493
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas/Salinimonas group; Alteromonas; unclassified Alteromonas
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA2493
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX552368 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated90.29%
contamination_estimated0.67%
environmental_sampletrue
genome_coverage61.86
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR594405.
Description

Uncultivated genome recovered from an assembly of the ERX552368 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451084
ID:
6451084

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center