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Uncultivated Enterococcus casseliflavus UBA4535 genome recovered from SRX822688

Identifiers
BioSample: SAMN06451044; Sample name: Enterococcus casseliflavus UBA4535; SRA: SRS2039108
Organism
Enterococcus casseliflavus
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA4535
isolation sourcemetal/plastic
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822688 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated95.85%
contamination_estimated0.38%
environmental_sampletrue
genome_coverage21.95
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749305.
Description

Uncultivated genome recovered from an assembly of the SRX822688 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451044
ID:
6451044

BioProject SRA Nucleotide

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