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Uncultivated Massilia sp. UBA1880 genome recovered from SRX822418

Identifiers
BioSample: SAMN06451005; Sample name: Massilia sp. UBA1880; SRA: SRS2038879
Organism
Massilia sp. UBA1880
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Telluria group; Massilia; unclassified Massilia
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA1880
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822418 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated85.57%
contamination_estimated0.20%
environmental_sampletrue
genome_coverage39.58
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749035.
Description

Uncultivated genome recovered from an assembly of the SRX822418 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451005
ID:
6451005

BioProject SRA Nucleotide

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