U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Firmicutes bacterium UBA3561 genome recovered from SRX742692

Identifiers
BioSample: SAMN06451002; Sample name: Firmicutes bacterium UBA3561; SRA: SRS2036248
Organism
Firmicutes bacterium UBA3561
cellular organisms; Bacteria; Bacillati; Bacillota; unclassified Bacillota
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationPacific Ocean
isolateUBA3561
isolation sourcesediment
metagenome sourcemarine sediment metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX742692 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated85.74%
contamination_estimated2.48%
environmental_sampletrue
genome_coverage46.28
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine sediment metagenome reads: SRR1628697.
Description

Uncultivated genome recovered from an assembly of the SRX742692 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451002
ID:
6451002

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center