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Uncultivated Methylophilaceae bacterium UBA5127 genome recovered from SRX806378

Identifiers
BioSample: SAMN06450970; Sample name: Methylophilaceae bacterium UBA5127; SRA: SRS2038449
Organism
Methylophilaceae bacterium UBA5127
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Nitrosomonadales; Methylophilaceae; unclassified Methylophilaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationSingapore
isolateUBA5127
isolation sourcesediments
metagenome sourcesediment metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX806378 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated87.66%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage8.29
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the sediment metagenome reads: SRR1706141.
Description

Uncultivated genome recovered from an assembly of the SRX806378 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450970
ID:
6450970

BioProject SRA Nucleotide

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