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Uncultivated Nitrospira sp. UBA6493 genome recovered from ERX633347

Identifiers
BioSample: SAMN06450968; Sample name: Nitrospira sp. UBA6493; SRA: SRS2031769
Organism
Nitrospira sp. UBA6493
cellular organisms; Bacteria; Pseudomonadati; Nitrospirota; Nitrospiria; Nitrospirales; Nitrospiraceae; Nitrospira; unclassified Nitrospira
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA6493
isolation sourceLogan River
metagenome sourceLogan River metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX633347 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated81.58%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage35.57
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the Logan River metagenome reads: ERR688346.
Description

Uncultivated genome recovered from an assembly of the ERX633347 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450968
ID:
6450968

BioProject SRA Nucleotide

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