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Uncultivated Lactobacillus amylovorus UBA624 genome recovered from ERX222797

Identifiers
BioSample: SAMN06450714; Sample name: Lactobacillus amylovorus UBA624; SRA: SRS2030451
Organism
Lactobacillus amylovorus
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA624
isolation sourcegut of vertebrate mammal
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX222797 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated83.93%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage558.26
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: ERR248263.
Description

Uncultivated genome recovered from an assembly of the ERX222797 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450714
ID:
6450714

BioProject SRA Nucleotide

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