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Uncultivated Alphaproteobacteria bacterium UBA3502 genome recovered from ERX556025

Identifiers
BioSample: SAMN06450558; Sample name: Alphaproteobacteria bacterium UBA3502; SRA: SRS2031388
Organism
Alphaproteobacteria bacterium UBA3502
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA3502
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX556025 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated85.72%
contamination_estimated2.32%
environmental_sampletrue
genome_coverage15.91
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599111.
Description

Uncultivated genome recovered from an assembly of the ERX556025 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450558
ID:
6450558

BioProject SRA Nucleotide

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