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Uncultivated Rhodopirellula sp. UBA1907 genome recovered from ERX552351

Identifiers
BioSample: SAMN06450544; Sample name: Rhodopirellula sp. UBA1907; SRA: SRS2031059
Organism
Rhodopirellula sp. UBA1907
cellular organisms; Bacteria; Pseudomonadati; PVC group; Planctomycetota; Planctomycetia; Pirellulales; Pirellulaceae; Rhodopirellula; unclassified Rhodopirellula
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA1907
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX552351 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated98.17%
contamination_estimated2.35%
environmental_sampletrue
genome_coverage17.88
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR594358.
Description

Uncultivated genome recovered from an assembly of the ERX552351 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450544
ID:
6450544

BioProject SRA Nucleotide

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