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Uncultivated Rhodospirillaceae bacterium UBA4492 genome recovered from SRX621521

Identifiers
BioSample: SAMN06450411; Sample name: Rhodospirillaceae bacterium UBA4492; SRA: SRS2034380
Organism
Rhodospirillaceae bacterium UBA4492
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; unclassified Rhodospirillaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Washington, DC
isolateUBA4492
isolation sourceBiofilm grown on the Cathode of a Microbial Fuel Cell (Biofilm MCL)
metagenome sourcebiofilm metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX621521 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.51%
contamination_estimated5.47%
environmental_sampletrue
genome_coverage34.94
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the biofilm metagenome reads: SRR1450398.
Description

Uncultivated genome recovered from an assembly of the SRX621521 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450411
ID:
6450411

BioProject SRA Nucleotide

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