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Uncultivated Methanosaeta harundinacea UBA1 genome recovered from SRX993396

Identifiers
BioSample: SAMN06027408; Sample name: Methanosaeta harundinacea UBA1; SRA: SRS1809134
Organism
Methanothrix harundinacea
cellular organisms; Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Methanomicrobia; Methanotrichales; Methanotrichaceae; Methanothrix
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationArctic Ocean: Arctic deep sea, Hakon Mosby Mud Volcano
isolateUBA1
isolation sourcesediment
metagenome sourcemarine sediment metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX993396
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated98.85%
contamination_estimated1.32%
environmental-sampleTRUE
genome_coverage25.82
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomicTRUE
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
Description

Uncultivated genome recovered from an assembly of the SRX993396 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2016-11-16
Accession:
SAMN06027408
ID:
6027408

BioProject SRA Nucleotide

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