Pathogen: clinical or host-associated sample from ... - BioSample

Pathogen: clinical or host-associated sample from Citrobacter freundii

Identifiers: BioSample: SAMN04339713; Sample name: 0000-0055-3505; SRA: SRS1224041

Organism: Citrobacter freundii
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex

Package: Pathogen: clinical or host-associated; version 1.0

Attributes

isolate	131
collected by	Brigham and Women's Hospital
collection date	2015
geographic location	USA:Boston
host	Homo sapiens
host disease	Missing
isolation source	sputum
latitude and longitude	Missing
host age	72
host sex	male
host subject id	SBJ-9937

BioProject: PRJNA278886
Retrieve all samples from this project

Submission: Brigham & Women's Hospital, Xiaomin Zhao; 2015-12-16

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
amikacin	susceptible	<=	2	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
amoxicillin-clavulanic acid	resistant	>=	32/16	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
cefazolin	resistant	>=	64	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
cefepime	susceptible	==	2	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
cefoxitin	resistant	>=	64	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
ceftazidime	resistant	==	16	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
ceftriaxone	resistant	==	16	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
ciprofloxacin	resistant	>=	4	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
ertapenem	resistant	==	4	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
gentamicin	resistant	>=	16	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
levofloxacin	resistant	>=	8	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
piperacillin-tazobactam	resistant	>=	128/4	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
tobramycin	intermediate	==	8	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
tetracycline	resistant	>=	16	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
trimethoprim-sulfamethoxazole	resistant	>=	16/304	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
meropenem	resistant	>=	16	mg/L	MIC	Vitek	Biomérieux	missing	CLSI
tetracycline	resistant	==	6	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
chloramphenicol	resistant	==	11	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
colistin	susceptible	==	13	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
sulfamethoxazole	resistant	==	6	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
tobramycin	resistant	==	8	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
ciprofloxacin	resistant	==	6	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
cephalothin	resistant	==	6	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
ampicillin	resistant	==	6	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
gentamicin	resistant	==	6	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
trimethoprim-sulfamethoxazole	resistant	==	6	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
amikacin	susceptible	==	22	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
cefotetan	susceptible	==	16	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
ceftazidime	resistant	==	16	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
imipenem	resistant	==	17	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
aztreonam	resistant	==	8	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
ceftriaxone	resistant	==	8	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
piperacillin	resistant	==	6	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
amoxicillin-clavulanic acid	resistant	==	6	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
ertapenem	resistant	==	15	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
levofloxacin	resistant	==	6	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
cefepime	resistant	==	17	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI
meropenem	resistant	==	17	mm	disk diffusion	missing	Becton Dickinson	missing	CLSI

Accession:: SAMN04339713
ID:: 4339713

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Pathogen: clinical or host-associated sample from Citrobacter freundii

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