Pathogen: clinical or host-associated sample from ... - BioSample

Pathogen: clinical or host-associated sample from Burkholderia cenocepacia

Identifiers: BioSample: SAMN02700076; Sample name: FDAARGOS_82; SRA: SRS583683

Organism: Burkholderia cenocepacia
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex

Attributes

geographic location	USA
collected by	Children's National Hospital
isolation source	sputum
collection date	2013-06-05
strain	FDAARGOS_82
latitude and longitude	Not Applicable
isolate name alias	FDAARGOS_82
host sex	female
host disease	Cystic fibrosis
host age	Missing
host	Homo sapiens
culture collection	FDA:FDAARGOS_82
isolate	Not Applicable
host disease outcome	Missing
host health state	Missing
host description	Missing
host disease stage	Missing
reference for biomaterial	Missing
passage history	Missing
sample type	Missing
identification method	phenotypic identification
host_age_range	>=21
Laboratory Host	Missing
Extraction Method	Missing
Extraction Date	Missing
Passage Date	Missing
type-material	Missing

Antimicrobials
Antimicrobial	CLSI Interpretation	Test Method	Vendor	Platform	Reagent	Numeric Result	Units
Trimethoprim/ Sulfmethoxazole	resistant	Broth dilution MIC	Siemens	Microscan Walkaway	Gram-Negative breakpoint combo	>2/38	micrograms/mL
Piperacillin/Tazobactam		Broth dilution MIC	Siemens	Microscan Walkaway	Gram-Negative breakpoint combo	>64	micrograms/mL
Ceftazidime	resistant	Broth dilution MIC	Siemens	Microscan Walkaway	Gram-Negative breakpoint combo	>16	micrograms/mL
Imipenem		Broth dilution MIC	Siemens	Microscan Walkaway	Gram-Negative breakpoint combo	>8	micrograms/mL
Meropenem	resistant	Broth dilution MIC	Siemens	Microscan Walkaway	Gram-Negative breakpoint combo	>8	micrograms/mL
Amikacin		Broth dilution MIC	Siemens	Microscan Walkaway	Gram-Negative breakpoint combo	>32	micrograms/mL
Gentamicin		Broth dilution MIC	Siemens	Microscan Walkaway	Gram-Negative breakpoint combo	>8	micrograms/mL
Tobramycin		Broth dilution MIC	Siemens	Microscan Walkaway	Gram-Negative breakpoint combo	>8	micrograms/mL
Ciprofloxacin		Broth dilution MIC	Siemens	Microscan Walkaway	Gram-Negative breakpoint combo	>2	micrograms/mL
Cefepime		Broth dilution MIC	Siemens	Microscan Walkaway	Gram-Negative breakpoint combo	>16	micrograms/mL
Aztreonam		Broth dilution MIC	Siemens	Microscan Walkaway	Gram-Negative breakpoint combo	>16	micrograms/mL
Levofloxacin	resistant	Broth dilution MIC	Siemens	Microscan Walkaway	Gram-Negative breakpoint combo	>4	micrograms/mL