MIGS Cultured Bacterial/Archaeal sample from Strep... - BioSample

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Result Filters

Identifiers: BioSample: SAMN00000310; Sample name: Streptococcus bovis; SRA: SRS000261

Organism: Streptococcus gallolyticus subsp. gallolyticus TX20005
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus gallolyticus; Streptococcus gallolyticus subsp. gallolyticus

Attributes

collection date	not determined
estimated size	2214000
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
local-scale environmental context	Homo sapiens-associated habitat [ENVO:00009003]
investigation type	missing
host taxonomy ID	9606 (9606)
project name	Streptococcus gallolyticus gallolyticus TX20005
geographic location	not determined
source material identifiers	BEI HM-272
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
environmental package	missing
strain	TX20005
sub species	gallolyticus
isolation source	missing
finishing strategy (depth of coverage)	Level 2: High-Quality Draft35.1x;25
project_type	Reference Genome
misc_param: HMP body site	Heart
nucleic acid extraction	not determined
assembly	Newbler v. 2.0-011609
misc_param: HMP supersite	other
sequencing method	454-Paired-end
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf

Description

Streptococcus bovis genomic sample

Keywords: GSC:MIxS;MIGS:6.0

BioProjects: PRJNA543187
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PRJNA30645 Streptococcus gallolyticus subsp. gallolyticus TX20005
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