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Fram Strait water column MAG- FRAM18_bin185

Identifiers
BioSample: SAMEA7768595; SRA: ERS5515844
Organism
uncultured Flavobacteriaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; environmental samples
Attributes
isolation sourcesea water
descriptionThis sample represents a MAG derived from the metagenomic sample ERS5427906, run ERR4918859 and assembly ERZ1699357
sample nameFRAM18_bin185
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2021-01-07T10:59:47Z
ENA-LAST-UPDATE2021-01-13T12:41:20Z
External IdSAMEA7768595
INSDC center nameMAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC first public2021-01-07T10:59:47Z
INSDC last update2021-01-13T12:41:20Z
INSDC statuspublic
Submitter IdFRAM18_bin185
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwaremegahit v1.2.9
binning softwareConcoct v1.1.0, DASTool v1.1.1
completeness score99.26
completeness softwareCheckM v1.0.13
contamination score0
metagenomic sourcemarine metagenome
sample derived fromERS5427906, ERR4918859, ERZ1699357
scientific_nameuncultured Flavobacteriaceae bacterium
sequencing methodIllumina HiSeq3000
BioProject
PRJEB41592 FRAM18_PS114
Retrieve all samples from this project

Submission
EBI; 2021-01-09
Accession:
SAMEA7768595
ID:
17268017

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