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Fram Strait water column MAG- FRAM18_bin328

Identifiers
BioSample: SAMEA7768561; SRA: ERS5515810
Organism
Akkermansiaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; PVC group; Verrucomicrobiota; Verrucomicrobiia; Verrucomicrobiales; Akkermansiaceae; unclassified Akkermansiaceae
Attributes
isolation sourcesea water
descriptionThis sample represents a MAG derived from the metagenomic sample ERS5427902, run ERR4918855 and assembly ERZ1699353
sample nameFRAM18_bin328
ENA first public2021-01-07
ENA last update2021-01-13
ENA-CHECKLISTERC000011
External IdSAMEA7768561
INSDC center aliasMAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC center nameMAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC first public2021-01-07T10:59:46Z
INSDC last update2021-01-13T13:10:21Z
INSDC statuspublic
Submitter IdFRAM18_bin328
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwareMegahit v1.2.9
binning softwareConcoct v1.1.0, DASTool v1.1.1
completeness score97.2
completeness softwareCheckM v1.0.13
contamination score0
metagenomic sourcemarine metagenome
sample derived fromERS5427902, ERR4918855, ERZ1699353
sequencing methodIllumina HiSeq3000 metagenome
BioProject
PRJEB41592 FRAM18_PS114
Retrieve all samples from this project

Submission
EBI; 2021-01-09
Accession:
SAMEA7768561
ID:
17267983

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