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Fram Strait water column MAG- FRAM18_bin216

Identifiers
BioSample: SAMEA7768557; SRA: ERS5515806
Organism
uncultured Flavobacteriaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; environmental samples
Attributes
isolation sourcesea water
descriptionThis sample represents a MAG derived from the metagenomic sample ERS5427910, run ERR4918863 and assembly ERZ1699363
sample nameFRAM18_bin216
ENA first public2021-01-07
ENA last update2021-01-13
ENA-CHECKLISTERC000011
External IdSAMEA7768557
INSDC center aliasMAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC center nameMAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC first public2021-01-07T10:59:46Z
INSDC last update2021-01-13T13:13:08Z
INSDC statuspublic
Submitter IdFRAM18_bin216
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwareMegahit v1.2.9
binning softwareConcoct v1.1.0, DASTool v1.1.1
completeness score70.61
completeness softwareCheckM v1.0.13
contamination score0
metagenomic sourcemarine metagenome
sample derived fromERS5427910, ERR4918863, ERZ1699363
sequencing methodIllumina HiSeq3000 metagenome
BioProject
PRJEB41592 FRAM18_PS114
Retrieve all samples from this project

Submission
EBI; 2021-01-09
Accession:
SAMEA7768557
ID:
17267979

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