U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Fram Strait water column MAG- FRAM18_bin174

Identifiers
BioSample: SAMEA7768554; SRA: ERS5515803
Organism
uncultured Flavobacteriales bacterium
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; environmental samples
Attributes
isolation sourcesea water
descriptionThis sample represents a MAG derived from the metagenomic sample ERS5427910, run ERR4918863 and assembly ERZ1699363
sample nameFRAM18_bin174
ENA first public2021-01-07
ENA last update2021-03-30
ENA-CHECKLISTERC000011
External IdSAMEA7768554
INSDC center aliasMAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC center nameMAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC first public2021-01-07T10:59:46Z
INSDC last update2021-03-30T10:46:23Z
INSDC statuspublic
Submitter IdFRAM18_bin174
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwareMegahit v1.2.9
binning softwareMetabat2 v2.12.1, DASTool v1.1.1
completeness score100
completeness softwareCheckM v1.0.13
contamination score0.54
metagenomic sourcemarine metagenome
sample derived fromERS5427910, ERR4918863, ERZ1699363
sequencing methodIllumina HiSeq 3000 metagenome
BioProject
PRJEB41592 FRAM18_PS114
Retrieve all samples from this project

Submission
EBI; 2021-01-09
Accession:
SAMEA7768554
ID:
17267976

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center