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Fram Strait water column MAG- FRAM18_bin252

Identifiers
BioSample: SAMEA7768537; SRA: ERS5515786
Organism
uncultured Pseudomonadales bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; environmental samples
Attributes
isolation sourcesea water
descriptionThis sample represents a MAG derived from the metagenomic sample ERS5427907, run ERR4918860 and assembly ERZ1699360
sample nameFRAM18_bin252
ENA first public2021-01-07
ENA last update2021-03-30
ENA-CHECKLISTERC000011
External IdSAMEA7768537
INSDC center aliasMAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC center nameMAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC first public2021-01-07T10:59:46Z
INSDC last update2021-03-30T10:50:32Z
INSDC statuspublic
Submitter IdFRAM18_bin252
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwareMegahit v1.2.9
binning softwareConcoct v1.1.0, DASTool v1.1.1
completeness score92.07
completeness softwareCheckM v1.0.13
contamination score0.19
metagenomic sourcemarine metagenome
sample derived fromERS5427907, ERR4918860, ERZ1699360
sequencing methodIllumina HiSeq3000 metagenome
BioProject
PRJEB41592 FRAM18_PS114
Retrieve all samples from this project

Submission
EBI; 2021-01-09
Accession:
SAMEA7768537
ID:
17267959

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