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Fram Strait water column MAG- FRAM18_bin053

Identifiers
BioSample: SAMEA7768528; SRA: ERS5515777
Organism
uncultured Rhodobacteraceae bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; environmental samples
Attributes
isolation sourcesea water
descriptionThis sample represents a MAG derived from the metagenomic sample ERS5427909, run ERR4918862 and assembly ERZ1699362
sample nameFRAM18_bin053
ENA first public2021-01-07
ENA last update2021-01-13
ENA-CHECKLISTERC000011
External IdSAMEA7768528
INSDC center aliasMAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC center nameMAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC first public2021-01-07T10:59:46Z
INSDC last update2021-01-13T13:34:38Z
INSDC statuspublic
Submitter IdFRAM18_bin053
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwareMegahit v1.2.9
binning softwareMetabat v2.12.1, DASTool v1.1.1
completeness score96.01
completeness softwareCheckM v1.0.13
contamination score0.32
metagenomic sourcemarine metagenome
sample derived fromERS5427909, ERR4918862, ERZ1699362
sequencing methodIllumina HiSeq3000 metagenome
BioProject
PRJEB41592 FRAM18_PS114
Retrieve all samples from this project

Submission
EBI; 2021-01-09
Accession:
SAMEA7768528
ID:
17267950

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