U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Fram Strait water column MAG- FRAM18_bin209

Identifiers
BioSample: SAMEA7768503; SRA: ERS5515752
Organism
uncultured Flavobacteriales bacterium
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; environmental samples
Attributes
isolation sourcesea water
descriptionThis sample represents a MAG derived from the metagenomic sample ERS5427902, run ERR4918855 and assembly ERZ1699353
sample nameFRAM18_bin209
ENA first public2021-01-07
ENA last update2021-01-13
ENA-CHECKLISTERC000011
External IdSAMEA7768503
INSDC center aliasMAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC center nameMAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC first public2021-01-07T10:59:45Z
INSDC last update2021-01-13T14:53:05Z
INSDC statuspublic
Submitter IdFRAM18_bin209
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwareMegahit v1.2.9
binning softwareMetabat v2.12.1, DASTool v1.1.1
completeness score62.8
completeness softwareCheckM v1.0.13
contamination score0
metagenomic sourcemarine metagenome
sample derived fromERS5427902, ERR4918855, ERZ1699353
sequencing methodIllumina HiSeq 3000 metagenome
BioProject
PRJEB41592 FRAM18_PS114
Retrieve all samples from this project

Submission
EBI; 2021-01-09
Accession:
SAMEA7768503
ID:
17267925

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center