Fram Strait water column MAG- FRAM18_bin081

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Organism: uncultured Hyphomicrobiales bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; environmental samples

Attributes

isolation source	sea water
description	This sample represents a MAG derived from the metagenomic sample ERS5427905, run ERR4918858 and assembly ERZ1699356
sample name	FRAM18_bin081
ENA first public	2021-01-07
ENA last update	2021-01-13
ENA-CHECKLIST	ERC000011
External Id	SAMEA7768481
INSDC center alias	MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC center name	MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC first public	2021-01-07T10:59:45Z
INSDC last update	2021-01-13T15:13:08Z
INSDC status	public
Submitter Id	FRAM18_bin081
assembly quality	Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs.
assembly software	Concoct v1.1.0
binning software	Concoct v1.1.0, DASTool v1.1.1
completeness score	93.26
completeness software	CheckM v1.0.13
contamination score	0
metagenomic source	marine metagenome
sample derived from	ERS5427905, ERR4918858, ERZ1699356
sequencing method	Illumina HiSeq 3000 metagenome