Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Organism: Setonix brachyurus (quokka)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Setonix

Attributes

geographic location	Australia
identified by	B Maryan
investigation type	phylogenetic study
sample name	55393
sex	female
tissue	muscle
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/0dfdf280-7bd0-4552-a801-f44a95021345
BPA_library_ID	55393
BPA_sample_ID	41986
CALLABLE	1201103
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:44:12Z
External Id	SAMEA7321366
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:44:12Z
INSDC status	public
LOW_COVERAGE	147320
NO_COVERAGE	1656
ReadLength	150bp
Submitter Id	55393
TCCP_ID	55393_HWWJFAFXY_TTCGCAA_S40
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	quokka
decimal_latitude	-34.25
decimal_longitude	116.15
depthmean	88.7
depthmedian	54
family	Macropodidae
genus	Setonix
geographic location (region and locality)	Western Australia
institution_name	Western Australian Museum
location_text	Manjimup area
order	Diprotodontia
phylum	Chordata
scientific_name	Setonix brachyurus
sequencing method	Illumina SBS, short PE reads
species	brachyurus
state_or_region	Western Australia
tissue_number	WAM M62355
tissue_preservation	ethanol
totalmapped2tgt	0.6452
totalpaired	0.6108
totalreadsstart	1574509
voucher_number	WAM M62355
voucher_or_tissue_number	WAM M62355