Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Setonix brachyurus (quokka)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Setonix

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	55363
sex	female
tissue	kidney
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/fcb38352-d77a-4890-a970-963cb2029a71
BPA_library_ID	55363
BPA_sample_ID	41952
CALLABLE	1289833
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:43:24Z
External Id	SAMEA7321343
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:43:24Z
INSDC status	public
LOW_COVERAGE	116126
NO_COVERAGE	443
ReadLength	150bp
Submitter Id	55363
TCCP_ID	55363_HWWJFAFXY_AAGCTAA_S61
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	quokka
depthmean	180.08
depthmedian	132
family	Macropodidae
genus	Setonix
geographic location (region and locality)	Western Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Wellington Dam
order	Diprotodontia
phylum	Chordata
scientific_name	Setonix brachyurus
sequencing method	Illumina SBS, short PE reads
species	brachyurus
state_or_region	Western Australia
tissue_number	ABTC83621
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.6238
totalpaired	0.5989
totalreadsstart	3367381
voucher_number	no voucher
voucher_or_tissue_number	ABTC83621