Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Petropseudes dahli (Rock-haunting ringtail)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Pseudocheiridae; Petropseudes

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	55354
sex	not determined
tissue	muscle
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/2208cb64-da41-4e03-9c14-e41f29857670
BPA_library_ID	55354
BPA_sample_ID	41943
CALLABLE	1142244
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:43:09Z
External Id	SAMEA7321334
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:43:09Z
INSDC status	public
LOW_COVERAGE	122397
NO_COVERAGE	215
ReadLength	150bp
Submitter Id	55354
TCCP_ID	55354_HWWJFAFXY_CCTCTAG_S84
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Rock-haunting ringtail
depthmean	53.07
depthmedian	33
family	Pseudocheiridae
genus	Petropseudes
geographic location (region and locality)	Western Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Windjana Gorge
order	Diprotodontia
phylum	Chordata
scientific_name	Petropseudes dahli
sequencing method	Illumina SBS, short PE reads
species	dahli
state_or_region	Western Australia
tissue_number	ABTC76149
tissue_preservation	ethanol
totalmapped2tgt	0.6329
totalpaired	0.5923
totalreadsstart	912402
voucher_number	no voucher
voucher_or_tissue_number	ABTC76149