Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Sminthopsis gilberti (Gilbert's dunnart)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis

Attributes

geographic location	Australia
identified by	M Adams
investigation type	phylogenetic study
sample name	55353
sex	female
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/ed653bd4-5e71-4855-88ff-ffd367a7ab1a
BPA_library_ID	55353
BPA_sample_ID	41942
CALLABLE	1340923
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:43:08Z
External Id	SAMEA7321333
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:43:08Z
INSDC status	public
LOW_COVERAGE	84229
NO_COVERAGE	127
ReadLength	150bp
Submitter Id	55353
TCCP_ID	55353_HWWJFAFXY_TGCATGA_S76
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Gilbert's dunnart
decimal_latitude	-33.95
decimal_longitude	115.07
depthmean	255.28
depthmedian	155
family	Dasyuridae
genus	Sminthopsis
geographic location (region and locality)	Western Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	5km SE Margaret River
order	Dasyuromorphia
phylum	Chordata
scientific_name	Sminthopsis gilberti
sequencing method	Illumina SBS, short PE reads
species	gilberti
state_or_region	Western Australia
tissue_number	ABTC72180
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.7001
totalpaired	0.6875
totalreadsstart	4312114
voucher_number	WAM M40544
voucher_or_tissue_number	WAM M40544

BioProject: PRJEB39788 Australian marsupial phylogeny
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