Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Ningaui timealeyi (Pilbara ningaui)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Ningaui

Attributes

geographic location	Australia
identified by	Norah K Cooper
investigation type	phylogenetic study
sample name	55348
sex	female
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/693522f7-d795-46d8-9dd8-4ee410cb41b8
BPA_library_ID	55348
BPA_sample_ID	41937
CALLABLE	1468881
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:42:59Z
External Id	SAMEA7321328
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:42:59Z
INSDC status	public
LOW_COVERAGE	198913
NO_COVERAGE	595
ReadLength	150bp
Submitter Id	55348
TCCP_ID	55348_HWWJFAFXY_TGGAATA_S36
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Pilbara ningaui
decimal_latitude	-21.61
decimal_longitude	118.97
depthmean	46.58
depthmedian	38
family	Dasyuridae
genus	Ningaui
geographic location (region and locality)	Western Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Port Hedland, Woodstock Station
order	Dasyuromorphia
phylum	Chordata
scientific_name	Ningaui timealeyi
sequencing method	Illumina SBS, short PE reads
species	timealeyi
state_or_region	Western Australia
tissue_number	ABTC62033
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.7567
totalpaired	0.7418
totalreadsstart	807955
voucher_number	WAM M29242
voucher_or_tissue_number	WAM M29242

BioProject: PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project