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Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Identifiers
BioSample: SAMEA7321324; Sample name: 55344; SRA: ERS5079859
Organism
Trichosurus vulpecula (common brushtail)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Phalangeridae; Trichosurus
Attributes
investigation typephylogenetic study
geographic locationAustralia
tissueliver
sub speciesraui
identified byunknown
sexfemale
bioproject_accessionPRJEB39788
sequencing methodIllumina SBS, short PE reads
geographic location (region and locality)Tasmania
BPA_sample_ID41933
BPA_library_ID55344
voucher_numberANWC M26523
tissue_numberABTC50744
voucher_or_tissue_numberANWC M26523
institution_nameAustralian Biological Tissue Collection, South Australian Museum
collectionMammal
tissue_preservationethanol | frozen
phylumChordata
classMammalia
orderDiprotodontia
familyPhalangeridae
genusTrichosurus
speciesvulpecula
wild_captiveunknown
state_or_regionTasmania
location_textLaunceston
decimal_latitude-41.43
decimal_longitude147.13
DNA_extraction_methodsalting out
TCCP_ID55344_HWWJFAFXY_GGATCAA_S4
depthmean158.75
depthmedian104
totalreadsstart3187893
totalmapped2tgt0.636
totalpaired0.6031
CALLABLE1383418
NO_COVERAGE452
LOW_COVERAGE132702
ReadLength150bp
AtlasLivingAustraliahttps://biocache.ala.org.au/occurrences/84c411b7-3859-4b8e-8ce1-205fc831238e
ENA-FIRST-PUBLIC2021-01-05
ENA-LAST-UPDATE2020-09-25
BioProject
PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project

Submission
EBI; 2021-01-06
Accession:
SAMEA7321324
ID:
17239780

BioProject Nucleotide

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