Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Spilocuscus rufoniger (black-spotted cuscus)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Phalangeridae; Spilocuscus

Attributes

geographic location	Papua New Guinea
investigation type	phylogenetic study
sample name	55332
sex	not determined
tissue	liver
BPA_library_ID	55332
BPA_sample_ID	41921
CALLABLE	1176271
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:42:32Z
External Id	SAMEA7321313
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:42:32Z
INSDC status	public
LOW_COVERAGE	124900
NO_COVERAGE	209
ReadLength	150bp
Submitter Id	55332
TCCP_ID	55332_HWWJFAFXY_GAATCTC_S19
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	black-spotted cuscus
decimal_latitude	-4.58
decimal_longitude	141.17
depthmean	54.23
depthmedian	40
family	Phalangeridae
genus	Phalanger
geographic location (region and locality)	Sandaun Province
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Kobobip
order	Diprotodontia
phylum	Chordata
scientific_name	Spilocuscus rufoniger
sequencing method	Illumina SBS, short PE reads
species	rufoniger
state_or_region	Sandaun Province
tissue_number	ABTC42634
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.6478
totalpaired	0.6161
totalreadsstart	916049
voucher_number	AM M.13520
voucher_or_tissue_number	AM M.13520