Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Sminthopsis youngsoni (lesser hairy-footed dunnart)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis

Attributes

geographic location	Australia
identified by	Catherine Kemper
investigation type	phylogenetic study
sample name	55328
sex	not determined
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/55791432-83e2-4ff1-956b-060682051813
BPA_library_ID	55328
BPA_sample_ID	41917
CALLABLE	1565189
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:42:25Z
External Id	SAMEA7321310
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:42:25Z
INSDC status	public
LOW_COVERAGE	153226
NO_COVERAGE	177
ReadLength	150bp
Submitter Id	55328
TCCP_ID	55328_HWWJFAFXY_CAGCATC_S82
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	lesser hairy-footed dunnart
decimal_latitude	-26.05
decimal_longitude	137.47
depthmean	161.52
depthmedian	117
family	Dasyuridae
genus	Sminthopsis
geographic location (region and locality)	South Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	14.4km WNW, Approdinna Attora Knolls, Simpson Desert Conservation Park
order	Dasyuromorphia
phylum	Chordata
scientific_name	Sminthopsis youngsoni
sequencing method	Illumina SBS, short PE reads
species	youngsoni
state_or_region	South Australia
tissue_number	ABTC38775
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.7481
totalpaired	0.7296
totalreadsstart	2954499
voucher_number	SAMA M20124
voucher_or_tissue_number	SAMA M20124

BioProject: PRJEB39788 Australian marsupial phylogeny
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