Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Echymipera rufescens (long-nosed echymipera)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Peramelemorphia; Peroryctidae; Echymipera

Attributes

geographic location	Australia
investigation type	phylogenetic study
sample name	55319
sex	male
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/0bb373d8-85f7-4522-9b7e-c83e27a0ddb9
BPA_library_ID	55319
BPA_sample_ID	41908
CALLABLE	1191308
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:42:10Z
External Id	SAMEA7321301
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:42:10Z
INSDC status	public
LOW_COVERAGE	125335
NO_COVERAGE	264
ReadLength	150bp
Submitter Id	55319
TCCP_ID	55319_HWWJFAFXY_CCGGTAC_S10
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	long-nosed echymipera
decimal_latitude	-12.73
decimal_longitude	143.25
depthmean	163.88
depthmedian	112
family	Peramelidae
genus	Echymipera
geographic location (region and locality)	Queensland
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	Iron Range, Cape York Peninsula
order	Peramelemorphia
phylum	Chordata
scientific_name	Echymipera rufescens
sequencing method	Illumina SBS, short PE reads
species	rufescens
state_or_region	Queensland
tissue_number	ABTC22857
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.5957
totalpaired	0.5566
totalreadsstart	3089462
voucher_number	AM M.15843
voucher_or_tissue_number	AM M.15843