Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Ningaui yvonnae (southern ningaui)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Ningaui

Attributes

geographic location	Australia
identified by	David Stemmer
investigation type	phylogenetic study
sample name	55315
sex	not determined
tissue	liver
BPA_library_ID	55315
BPA_sample_ID	41904
CALLABLE	1362889
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:42:04Z
External Id	SAMEA7321297
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:42:04Z
INSDC status	public
LOW_COVERAGE	141543
NO_COVERAGE	1204
ReadLength	150bp
Submitter Id	55315
TCCP_ID	55315_HWWJFAFXY_CCGGATA_S85
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	southern ningaui
decimal_latitude	-33.22
decimal_longitude	137.07
depthmean	177.33
depthmedian	89
family	Dasyuridae
genus	Ningaui
geographic location (region and locality)	South Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	4.6km WSW, Mount Middleback, Middleback Ranges
order	Dasyuromorphia
phylum	Chordata
scientific_name	Ningaui yvonnae
sequencing method	Illumina SBS, short PE reads
species	yvonneae
state_or_region	South Australia
tissue_number	ABTC118321
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.6938
totalpaired	0.6665
totalreadsstart	3216863
voucher_number	SAMA M24434
voucher_or_tissue_number	SAMA M24434