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Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Identifiers
BioSample: SAMEA7321201; Sample name: 53483; SRA: ERS5079736
Organism
Petrogale wilkinsi (Wilkin's rock-wallaby)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Petrogale
Attributes
investigation typephylogenetic study
geographic locationAustralia
tissueear epithelium
sub speciescarpentarian lineage
identified byMark Eldridge
sexmale
bioproject_accessionPRJEB39788
sequencing methodIllumina SBS, short PE reads
geographic location (region and locality)Northern Territory
BPA_sample_ID40774
BPA_library_ID53483
voucher_numberAM M.45290.001
tissue_numberS1178
voucher_or_tissue_numberAM M.45290.001
institution_nameAustralian Museum
collectionMammalogy
tissue_preservationethanol
phylumChordata
classMammalia
orderDiprotodontia
familyMacropodidae
genusPetrogale
specieswilkinsi
wild_captivewild
state_or_regionNorthern Territory
location_textRed Bank Mine, Wollogorang
decimal_latitude-17.19
decimal_longitude137.74
DNA_extraction_methodsalting out
TCCP_ID53483_AHGVYVBCX2_AGTCAGA_S49
depthmean49.47
depthmedian40
totalreadsstart1750031
totalmapped2tgt0.7315
totalpaired0.6946
CALLABLE2288535
NO_COVERAGE171
LOW_COVERAGE230008
ReadLength100bp
AtlasLivingAustraliahttps://biocache.ala.org.au/occurrences/4d9da108-7101-48a8-bf62-8fcd6235b252
ENA-FIRST-PUBLIC2021-01-05
ENA-LAST-UPDATE2020-09-25
BioProject
PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project

Submission
EBI; 2021-01-06
Accession:
SAMEA7321201
ID:
17239657

BioProject Nucleotide

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