Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Petrogale lateralis pearsoni
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Petrogale; Petrogale lateralis

Attributes

geographic location	Australia
identified by	Peter Hornsby
investigation type	phylogenetic study
sample name	53449
sex	female
sub species	pearsoni
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/194a4de4-ad77-49d1-81eb-67e2d2d7fa16
BPA_library_ID	53449
BPA_sample_ID	40740
CALLABLE	2058388
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:38:20Z
External Id	SAMEA7321167
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:38:20Z
INSDC status	public
LOW_COVERAGE	202692
NO_COVERAGE	68
ReadLength	100bp
Submitter Id	53449
TCCP_ID	53449_AHGVYVBCX2_CGACCTG_S15
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	Black-footed rock-wallaby
decimal_latitude	-33.95
decimal_longitude	134.27
depthmean	85.24
depthmedian	60
family	Macropodidae
genus	Petrogale
geographic location (region and locality)	South Australia
institution_name	Australian Museum
location_text	South Pearson Island
order	Diprotodontia
phylum	Chordata
scientific_name	Petrogale lateralis pearsoni
sequencing method	Illumina SBS, short PE reads
species	lateralis
state_or_region	South Australia
tissue_number	S997
tissue_preservation	frozen
totalmapped2tgt	0.7725
totalpaired	0.7402
totalreadsstart	2562203
voucher_number	AM M.24572
voucher_or_tissue_number	AM M.24572
wild_captive	captive

BioProject: PRJEB39788 Australian marsupial phylogeny
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