Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Organism: Petrogale rothschildi
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Petrogale

Attributes

geographic location	Australia
identified by	Peter G Kendrick
investigation type	phylogenetic study
sample name	53438
sex	male
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/33d2ea6f-e8d2-4a8d-a6cd-9369d729cb32
BPA_library_ID	53438
BPA_sample_ID	40729
CALLABLE	2207675
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:38:02Z
External Id	SAMEA7321156
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:38:02Z
INSDC status	public
LOW_COVERAGE	214977
NO_COVERAGE	149
ReadLength	100bp
Submitter Id	53438
TCCP_ID	53438_AHGVYVBCX2_GGATCAA_S4
bioproject_accession	PRJEB39788
class	Mammalia
collection	EBU
common name	Rothschild's rock-wallaby
decimal_latitude	-20.58
decimal_longitude	116.56
depthmean	80.71
depthmedian	60
family	Macropodidae
genus	Petrogale
geographic location (region and locality)	Western Australia
institution_name	Australian Museum
location_text	Enderby Island, Dampier Archipelago
order	Diprotodontia
phylum	Chordata
scientific_name	Petrogale rothschildi
sequencing method	Illumina SBS, short PE reads
species	rothschildi
state_or_region	Western Australia
tissue_number	S1723
tissue_preservation	frozen
totalmapped2tgt	0.7768
totalpaired	0.7444
totalreadsstart	2583712
voucher_number	WAM M51607
voucher_or_tissue_number	WAM M51607
wild_captive	wild