Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Isoodon obesulus (southern brown bandicoot)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Peramelemorphia; Peramelidae; Isoodon

Attributes

investigation type	phylogenetic study
geographic location	Australia
tissue	unknown
sub species	mount lofty ranges
identified by	unknown
sex	not determined
bioproject_accession	PRJEB39788
sequencing method	Illumina SBS, short PE reads
geographic location (region and locality)	South Australia
BPA_sample_ID	40712
BPA_library_ID	53419
voucher_number	no voucher
tissue_number	N746
voucher_or_tissue_number	N746
institution_name	South Australian Museum
collection	unknown
tissue_preservation	unknown
phylum	Chordata
class	Mammalia
order	Peramelemorphia
family	Peramelidae
genus	Isoodon
species	obesulus
wild_captive	unknown
state_or_region	South Australia
location_text	Mount Lofty Range
decimal_latitude	-35.08
decimal_longitude	138.7
DNA_extraction_method	unknown
TCCP_ID	53419_AHGVYGBCX2_AGAATTA_S81
depthmean	47.52
depthmedian	36
totalreadsstart	2986211
totalmapped2tgt	0.3166
totalpaired	0.285
CALLABLE	1605138
NO_COVERAGE	52
LOW_COVERAGE	176713
ReadLength	100bp
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/8fa005e7-9f3f-4305-af4e-772b2e633f40
ENA-FIRST-PUBLIC	2021-01-05
ENA-LAST-UPDATE	2020-09-25