Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Lagorchestes hirsutus (rufous hare-wallaby)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Lagorchestes

Attributes

investigation type	phylogenetic study
geographic location	Australia
tissue	ear epithelium
sub species	central australia
identified by	Colleen Sims \| DBCA
sex	not determined
bioproject_accession	PRJEB39788
sequencing method	Illumina SBS, short PE reads
geographic location (region and locality)	Western Australia
BPA_sample_ID	40418
BPA_library_ID	53378
voucher_number	no voucher
tissue_number	DEC02927
voucher_or_tissue_number	DEC02927
institution_name	Department of Biodiversity, Conservation and Attractions
collection	Mammal
tissue_preservation	ethanol
phylum	Chordata
class	Mammalia
order	Diprotodontia
family	Macropodidae
genus	Lagorchestes
species	hirsutus
wild_captive	captive
state_or_region	Western Australia
location_text	Matuwa (Lorna Glen) enclosure, Wiluna
decimal_latitude	-26.19
decimal_longitude	121.34
DNA_extraction_method	salting out
TCCP_ID	53378_AHGVYGBCX2_TTCGCAA_S40
depthmean	58.28
depthmedian	49
totalreadsstart	3919690
totalmapped2tgt	0.3347
totalpaired	0.3142
CALLABLE	1847713
NO_COVERAGE	86
LOW_COVERAGE	191154
ReadLength	100bp
AtlasLivingAustralia	NA
ENA-FIRST-PUBLIC	2021-01-05
ENA-LAST-UPDATE	2020-09-25