Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Organism: Lagorchestes hirsutus (rufous hare-wallaby)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Lagorchestes

Attributes

investigation type	phylogenetic study
geographic location	Australia
tissue	ear epithelium
sub species	bernieri
identified by	Neil Thomas \| DBCA
sex	female
bioproject_accession	PRJEB39788
sequencing method	Illumina SBS, short PE reads
geographic location (region and locality)	Western Australia
BPA_sample_ID	40368
BPA_library_ID	53354
voucher_number	no voucher
tissue_number	DEC02874
voucher_or_tissue_number	DEC02874
institution_name	Department of Biodiversity, Conservation and Attractions
collection	Mammal
tissue_preservation	ethanol
phylum	Chordata
class	Mammalia
order	Diprotodontia
family	Macropodidae
genus	Lagorchestes
species	hirsutus
wild_captive	wild
state_or_region	Western Australia
location_text	Dorre Island
decimal_latitude	-25.18
decimal_longitude	113.1
DNA_extraction_method	salting out
TCCP_ID	53354_AHGVYGBCX2_TAATGCG_S16
depthmean	45.06
depthmedian	40
totalreadsstart	2815140
totalmapped2tgt	0.3378
totalpaired	0.3204
CALLABLE	1730191
NO_COVERAGE	31
LOW_COVERAGE	187170
ReadLength	100bp
AtlasLivingAustralia	NA
ENA-FIRST-PUBLIC	2021-01-05
ENA-LAST-UPDATE	2020-09-25