Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Lagostrophus fasciatus (banded hare-wallaby)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Macropodidae; Lagostrophus

Attributes

investigation type	phylogenetic study
geographic location	Australia
tissue	tail
sub species	fasciatus
identified by	B Maryan
sex	female
bioproject_accession	PRJEB39788
sequencing method	Illumina SBS, short PE reads
geographic location (region and locality)	Western Australia
BPA_sample_ID	40288
BPA_library_ID	52916
voucher_number	WAM M64999
tissue_number	WAM M64999
voucher_or_tissue_number	WAM M64999
institution_name	Western Australian Museum
collection	Mammal
tissue_preservation	ethanol
phylum	Chordata
class	Mammalia
order	Diprotodontia
family	Macropodidae
genus	Lagostrophus
species	fasciatus
wild_captive	unknown
state_or_region	Western Australia
location_text	Bernier Island
decimal_latitude	-24.87
decimal_longitude	113.13
DNA_extraction_method	salting out
TCCP_ID	52916_AH5VVVBCX2_CGAGATC_S95
depthmean	131.65
depthmedian	100
totalreadsstart	3970701
totalmapped2tgt	0.7599
totalpaired	0.7262
CALLABLE	1981917
NO_COVERAGE	31
LOW_COVERAGE	169245
ReadLength	100bp
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/e3001632-69b1-4e55-acb7-172967833dd9
ENA-FIRST-PUBLIC	2021-01-05
ENA-LAST-UPDATE	2020-09-25