Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Isoodon auratus barrowensis
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Peramelemorphia; Peramelidae; Isoodon; Isoodon auratus

Attributes

geographic location	Australia
identified by	R J Teale
investigation type	phylogenetic study
sample name	52913
sex	male
sub species	barrowensis
tissue	muscle
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/0921b014-3300-4ccf-9eb3-22a7f8f2d83c
BPA_library_ID	52913
BPA_sample_ID	40285
CALLABLE	1619365
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:35:23Z
External Id	SAMEA7321056
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:35:23Z
INSDC status	public
LOW_COVERAGE	178032
NO_COVERAGE	8
ReadLength	100bp
Submitter Id	52913
TCCP_ID	52913_AH5VVVBCX2_GCTAATC_S92
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	Golden bandicoot
decimal_latitude	-20.83
decimal_longitude	115.44
depthmean	49
depthmedian	34
family	Peramelidae
genus	Isoodon
geographic location (region and locality)	Western Australia
institution_name	Western Australian Museum
location_text	Barrow Island
order	Peramelemorphia
phylum	Chordata
scientific_name	Isoodon auratus barrowensis
sequencing method	Illumina SBS, short PE reads
species	auratus
state_or_region	Western Australia
tissue_number	WAM M55150
tissue_preservation	ethanol
totalmapped2tgt	0.7106
totalpaired	0.6606
totalreadsstart	1347606
voucher_number	WAM M55150
voucher_or_tissue_number	WAM M55150