Australian marsupial phylogenetic study. Bioplatfo... - BioSample

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Result Filters

Organism: Cercartetus caudatus (long-tailed pygmy possum)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Diprotodontia; Burramyidae; Cercartetus

Attributes

geographic location	Papua New Guinea
investigation type	phylogenetic study
sample name	52897
sex	female
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/0ff1ea67-a813-423a-9c55-a3ba7fdf928d
BPA_library_ID	52897
BPA_sample_ID	40269
CALLABLE	1891240
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:27Z
ENA-LAST-UPDATE	2020-09-25T00:34:56Z
External Id	SAMEA7321040
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:27Z
INSDC last update	2020-09-25T00:34:56Z
INSDC status	public
LOW_COVERAGE	137489
NO_COVERAGE	167
ReadLength	100bp
Submitter Id	52897
TCCP_ID	52897_AH5VVVBCX2_TGCATGA_S76
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammalogy
common name	long-tailed pygmy possum
decimal_latitude	-5.02
decimal_longitude	141.12
depthmean	280.61
depthmedian	186
family	Burramyidae
genus	Cercartetus
geographic location (region and locality)	West Sepik Province
institution_name	Australian Museum
location_text	Dokfuma, Star Mountains
order	Diprotodontia
phylum	Chordata
scientific_name	Cercartetus caudatus
sequencing method	Illumina SBS, short PE reads
species	caudatus
state_or_region	West Sepik Province
tissue_number	EBU26445
tissue_preservation	frozen
totalmapped2tgt	0.7019
totalpaired	0.6697
totalreadsstart	8839887
voucher_number	AM M.19095.001
voucher_or_tissue_number	AM M.19095.001